8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_255686
Cell Name :  TG_2mo_9_16
Archive Name :  Dierssen
Species Name :  mouse
Strain :  TgDyrk1A
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  dorsal, pyramidal layer
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  neuTube.swc
Experiment Protocol :  in vitro
Experimental Condition :  Dyrk1A overexpression
Staining Method :  lucifer yellow
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2023-03-10
Date of Upload :  2023-03-23
Persistence Vector :  TG_2mo_9_16.pvec
Note :  Dendrites were reconstructed completely within the slice, but only the basal trees were included

Reference Article
Related Article Reference :  Deficits in neuronal architecture but not over-inhibition are main determinants of reduced neuronal network activity in a mouse model of overexpression ofDyrk1A

Measurements
Soma Surface :  11301.6 μm2
Number of Stems :  1
Number of Bifurcations :  12
Number of Branches :  25
Overall Width :  102.58 μm
Overall Height :  132.82 μm
Overall Depth :  34.6 μm
Average Diameter :  8.16 μm
Total Length :  1148.15 μm
Total Surface :  31288 μm2
Total Volume :  75064.9 μm3
Max Euclidean Distance :  164.63 μm
Max Path Distance :  294.74 μm
Max Branch Order :  6
Average Contraction :  0.92
Total Fragmentation :  379
Partition Asymmetry :  0.42
Average Rall's Ratio :  1.91
Average Bifurcation Angle Local :  78.83°
Average Bifurcation Angle Remote :  65.54°
Fractal Dimension :  1.02

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