8.6.70 - Released: 2025-02-04 - Content: 272535 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_270416
Cell Name :  TE3F-202_1_D
Archive Name :  Seo
Species Name :  mouse
Strain :  P301S::ApoE3/ApoE3
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  280.0 days
Max Age :  280.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  molecular layer
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  in vivo
Experimental Condition :  short-term antibiotic (ABX) treatment early in life
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2023-09-04
Date of Upload :  2023-09-13
Persistence Vector :  TE3F-202_1_D.pvec
Note :  Pups assigned to the ABX treatment group were gavaged with 100 microliters of an antibiotic cocktail that contained 4 mg/mL kanamycin, 0.35 mg/mL gentamicin; 8500 U/mL colistin, 2.15 mg/mL metronidazole, and 0.45 mg/mL vancomycin. Gavage occurred daily from postnatal day 16 to 22 using animal feeding needles. This reconstruction was obtained from Tau-positive mice.

Reference Article
Related Article Reference :  ApoE isoform- and microbiota-dependent progression of neurodegeneration in a mouse model of tauopathy.

Measurements
Soma Surface :  12.31 μm2
Number of Stems :  4
Number of Bifurcations :  14
Number of Branches :  32
Overall Width :  60.92 μm
Overall Height :  21.77 μm
Overall Depth :  4.61 μm
Average Diameter :  0.25 μm
Total Length :  245.56 μm
Total Surface :  192.87 μm2
Total Volume :  12.05 μm3
Max Euclidean Distance :  41.68 μm
Max Path Distance :  50.21 μm
Max Branch Order :  5
Average Contraction :  0.89
Total Fragmentation :  667
Partition Asymmetry :  0.57
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  56.91°
Average Bifurcation Angle Remote :  42.32°
Fractal Dimension :  1.07

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