8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_255439
Cell Name :  TDIE1301a007_Cell26
Archive Name :  Zeng
Species Name :  mouse
Strain :  Thy1-GFP-M
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  primary somatosensory
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Amira.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  transverse
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Amira
Date of Deposition :  2023-02-12
Date of Upload :  2023-03-14
Persistence Vector :  TDIE1301a007_Cell26.pvec

Reference Article
Related Article Reference :  Chemical sectioning fluorescence tomography: high-throughput, high-contrast, multicolor, whole-brain imaging at subcellular resolution.

Measurements
Soma Surface :  1577.85 μm2
Number of Stems :  7
Number of Bifurcations :  725
Number of Branches :  1457
Overall Width :  2694.34 μm
Overall Height :  2269.31 μm
Overall Depth :  996.73 μm
Average Diameter :  0.48 μm
Total Length :  66318.1 μm
Total Surface :  93536 μm2
Total Volume :  21756.1 μm3
Max Euclidean Distance :  4468.65 μm
Max Path Distance :  5479.6 μm
Max Branch Order :  31
Average Contraction :  0.93
Total Fragmentation :  15651
Partition Asymmetry :  0.65
Average Rall's Ratio :  20.43
Average Bifurcation Angle Local :  69.54°
Average Bifurcation Angle Remote :  78.48°
Fractal Dimension :  1.02

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