8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_109956
Cell Name :  T8-Day-2-Recon-no-axons-no-filos
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  7.0 days
Max Age :  7.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  optic
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  T8-Day-2-Recon-no-axons-no-filos.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  340.8 μm2
Number of Stems :  1
Number of Bifurcations :  11
Number of Branches :  23
Overall Width :  79.83 μm
Overall Height :  64.82 μm
Overall Depth :  19.92 μm
Average Diameter :  0.78 μm
Total Length :  450.1 μm
Total Surface :  1144.03 μm2
Total Volume :  287.95 μm3
Max Euclidean Distance :  104.15 μm
Max Path Distance :  166.06 μm
Max Branch Order :  5
Average Contraction :  0.89
Total Fragmentation :  345
Partition Asymmetry :  0.44
Average Rall's Ratio :  2.09
Average Bifurcation Angle Local :  53.98°
Average Bifurcation Angle Remote :  72.03°
Fractal Dimension :  1.03

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