8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_110036
Cell Name :  T6-Day-1-no-filos_1
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  6.0 days
Max Age :  6.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  optic
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  T6-Day-1-no-filos_1.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  726.54 μm2
Number of Stems :  4
Number of Bifurcations :  42
Number of Branches :  88
Overall Width :  27.3 μm
Overall Height :  108.46 μm
Overall Depth :  41.47 μm
Average Diameter :  0.81 μm
Total Length :  819.88 μm
Total Surface :  2416.98 μm2
Total Volume :  893.85 μm3
Max Euclidean Distance :  93.08 μm
Max Path Distance :  112.9 μm
Max Branch Order :  15
Average Contraction :  0.93
Total Fragmentation :  874
Partition Asymmetry :  0.55
Average Rall's Ratio :  1.3
Average Bifurcation Angle Local :  73.18°
Average Bifurcation Angle Remote :  73.49°
Fractal Dimension :  1.03

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