8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_109980
Cell Name :  T5-Day-3-no-filos_1
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  8.0 days
Max Age :  8.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  optic
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  T5-Day-3-no-filos_1.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  751.68 μm2
Number of Stems :  6
Number of Bifurcations :  111
Number of Branches :  228
Overall Width :  50.62 μm
Overall Height :  102.57 μm
Overall Depth :  77.85 μm
Average Diameter :  0.56 μm
Total Length :  2398.43 μm
Total Surface :  4617.95 μm2
Total Volume :  1069.94 μm3
Max Euclidean Distance :  114.21 μm
Max Path Distance :  178.54 μm
Max Branch Order :  18
Average Contraction :  0.92
Total Fragmentation :  1935
Partition Asymmetry :  0.6
Average Rall's Ratio :  2.41
Average Bifurcation Angle Local :  69.67°
Average Bifurcation Angle Remote :  75.16°
Fractal Dimension :  1.04

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