8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_282946
Cell Name :  T15_F1_L_An-recOR_mer-unc
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4s1101t, UAS:FuGIMA
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  6.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  pretectal region, left, alar part
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  Dorsal thalamus-projecting, Tegmentum-projecting, Hypothalamus-projecting, Medulla oblongata-projecting
Original Format :  Simple Neurite Tracer.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  photo-activatable green fluorescent protein (pa-GFP)
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-11-24
Date of Upload :  2024-04-30
Persistence Vector :  T15_F1_L_An-recOR_mer-unc.pvec

Reference Article
Related Article Reference :  Neuronal Architecture of a Visual Center that Processes Optic Flow.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  66
Number of Branches :  133
Overall Width :  49.43 μm
Overall Height :  196.91 μm
Overall Depth :  49.65 μm
Average Diameter :  0.72 μm
Total Length :  1547.49 μm
Total Surface :  4074.27 μm2
Total Volume :  1684.08 μm3
Max Euclidean Distance :  135.81 μm
Max Path Distance :  337.04 μm
Max Branch Order :  13
Average Contraction :  0.6
Total Fragmentation :  4841
Partition Asymmetry :  0.49
Average Rall's Ratio :  16.09
Average Bifurcation Angle Local :  50.8°
Average Bifurcation Angle Remote :  71.18°
Fractal Dimension :  1.32

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