8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_282820
Cell Name :  T145_F1_R_An-recOR_mer-unc
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4s1101t, UAS:FuGIMA
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  6.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  pretectal region, right, alar part
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  Dorsal thalamus-projecting, Pretectum-projecting, retinal arborization field 6 (AF6)-projecting
Original Format :  Simple Neurite Tracer.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  photo-activatable green fluorescent protein (pa-GFP)
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-11-24
Date of Upload :  2024-04-30
Persistence Vector :  T145_F1_R_An-recOR_mer-unc.pvec

Reference Article
Related Article Reference :  Neuronal Architecture of a Visual Center that Processes Optic Flow.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  17
Number of Branches :  36
Overall Width :  47.59 μm
Overall Height :  54.96 μm
Overall Depth :  15.94 μm
Average Diameter :  0.69 μm
Total Length :  448.56 μm
Total Surface :  1154.22 μm2
Total Volume :  473.1 μm3
Max Euclidean Distance :  62.15 μm
Max Path Distance :  160.08 μm
Max Branch Order :  10
Average Contraction :  0.57
Total Fragmentation :  1123
Partition Asymmetry :  0.6
Average Rall's Ratio :  12.71
Average Bifurcation Angle Local :  50.71°
Average Bifurcation Angle Remote :  76.24°
Fractal Dimension :  1.3

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