8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_109978
Cell Name :  T1-Day-3-no-filos_1
Archive Name :  Cohen-Cory
Species Name :  Xenopus laevis
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  8.0 days
Max Age :  8.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  tadpole
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  optic
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neuromantic.swc
Experiment Protocol :  in vivo
Experimental Condition :  DSCAM downregulation
Staining Method :  Alexa Fluor 488 - Dextran
Slicing Direction :  horizontal
Slice Thickness :  1  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Neuromantic
Date of Deposition :  2019-04-11
Date of Upload :  2019-08-19
Persistence Vector :  T1-Day-3-no-filos_1.pvec
Note :  Embryonic stage 45. Imaging started 5 days post fertilization. Co-labeled by single-cell electroporation with Lissamine-tagged morpholino

Reference Article
Related Article Reference :  DSCAM differentially modulates pre- and postsynaptic structural and functional central connectivity during visual system wiring.

Measurements
Soma Surface :  375.63 μm2
Number of Stems :  1
Number of Bifurcations :  36
Number of Branches :  73
Overall Width :  78.23 μm
Overall Height :  87.76 μm
Overall Depth :  41 μm
Average Diameter :  0.57 μm
Total Length :  1084.02 μm
Total Surface :  2028.42 μm2
Total Volume :  386.03 μm3
Max Euclidean Distance :  115.23 μm
Max Path Distance :  156.08 μm
Max Branch Order :  13
Average Contraction :  0.92
Total Fragmentation :  1250
Partition Asymmetry :  0.6
Average Rall's Ratio :  1.77
Average Bifurcation Angle Local :  78.94°
Average Bifurcation Angle Remote :  75.8°
Fractal Dimension :  1.03

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