8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_124521
Cell Name :  Series009Cropped1ok
Archive Name :  Hernandez-Garzon
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  4.0 months
Max Age :  4.0 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  basal ganglia
Secondary Brain Region :  striatum
Tertiary Brain Region :  Putamen
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  fibrous astrocyte
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  induced astrocyte reactivity
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  120  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Vaa3D
Date of Deposition :  2019-10-01
Date of Upload :  2020-06-29
Persistence Vector :  Series009Cropped1ok.pvec
Note :  Intraparenchimal Injection of lentiviral particles coding for human ciliary neurotrophic factor (CNTF)

Reference Article
Related Article Reference :  Diffusion-weighted magnetic resonance spectroscopy enables cell-specific monitoring of astrocyte reactivity in vivo.

Measurements
Soma Surface :  95.06 μm2
Number of Stems :  7
Number of Bifurcations :  468
Number of Branches :  943
Overall Width :  36.8 μm
Overall Height :  112.9 μm
Overall Depth :  61.52 μm
Average Diameter :  0.47 μm
Total Length :  6611.86 μm
Total Surface :  8706.31 μm2
Total Volume :  2765.51 μm3
Max Euclidean Distance :  80.13 μm
Max Path Distance :  135.02 μm
Max Branch Order :  60
Average Contraction :  0.9
Total Fragmentation :  7717
Partition Asymmetry :  0.68
Average Rall's Ratio :  2.02
Average Bifurcation Angle Local :  54.8°
Average Bifurcation Angle Remote :  61.53°
Fractal Dimension :  1.06

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