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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_171113 |
| Cell Name : | SNr_reconstructions_Figure_1a |
| Archive Name : | Dong |
| Species Name : | mouse |
| Strain : | C57BL/6J |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Complete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 76.0 days
|
| Max Age : | 76.0 days
|
| Gender : |
Male
|
| Min Weight : | 27 grams
|
| Max Weight : | 27 grams
|
| Development : | adult |
| Primary Brain Region : | basal ganglia |
| Secondary Brain Region : | substantia nigra |
| Tertiary Brain Region : | pars reticulata |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | projection |
| Tertiary Cell Class : | nigrothalamic |
| Original Format : | Aivia.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | Not applicable |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | water |
| Magnification : | 10x |
| Reconstruction Method : | Aivia |
| Date of Deposition : | 2021-10-06 |
| Date of Upload : | 2021-12-20 |
| Persistence Vector : | SNr_reconstructions_Figure_1a.pvec |
|
|
| Reference Article |
| Related Article Reference : | The mouse cortico-basal ganglia-thalamic network. |
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| Measurements |
| Soma Surface : |
1382.99 μm2 |
| Number of Stems : |
5 |
| Number of Bifurcations : |
5 |
| Number of Branches : |
15 |
| Overall Width : |
921.92 μm |
| Overall Height : |
1090 μm |
| Overall Depth : |
187.44 μm |
| Average Diameter : |
6.84 μm |
| Total Length : |
4249.61 μm |
| Total Surface : |
93008 μm2 |
| Total Volume : |
166275 μm3 |
| Max Euclidean Distance : |
717.83 μm |
| Max Path Distance : |
944.61 μm |
| Max Branch Order : |
2 |
| Average Contraction : |
0.89 |
| Total Fragmentation : |
451 |
| Partition Asymmetry : |
0.4 |
| Average Rall's Ratio : |
1.91 |
| Average Bifurcation Angle Local : |
77.25° |
| Average Bifurcation Angle Remote : |
75.2° |
| Fractal Dimension : |
1.02 |
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