8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_183673
Cell Name :  SLC13A5_Cortex_WT1-5
Archive Name :  Puglielli
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  17.5 days
Max Age :  18.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Imaris.ims
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  immunostaining, phalloidin-TRITC
Slicing Direction :  transverse
Slice Thickness :  0.15  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Imaris
Date of Deposition :  2022-04-20
Date of Upload :  2022-05-11
Persistence Vector :  SLC13A5_Cortex_WT1-5.pvec

Reference Article
Related Article Reference :  SLC13A5/sodium-citrate co-transporter overexpression causes disrupted white matter integrity and an autistic-like phenotype.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  67
Number of Branches :  136
Overall Width :  6.52 μm
Overall Height :  158.56 μm
Overall Depth :  184.16 μm
Average Diameter :  1.51 μm
Total Length :  1215.94 μm
Total Surface :  5757.72 μm2
Total Volume :  2180.52 μm3
Max Euclidean Distance :  162.84 μm
Max Path Distance :  221.67 μm
Max Branch Order :  39
Average Contraction :  0.94
Total Fragmentation :  3006
Partition Asymmetry :  0.73
Average Rall's Ratio :  1.96
Average Bifurcation Angle Local :  60.37°
Average Bifurcation Angle Remote :  64.57°
Fractal Dimension :  1.03

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