8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_183714
Cell Name :  SLC13A5_Cortex_Tg3-1
Archive Name :  Puglielli
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  17.5 days
Max Age :  18.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Imaris.ims
Experiment Protocol :  culture
Experimental Condition :  Camk2a-tTA;TRE-SLC13A5
Staining Method :  immunostaining, phalloidin-TRITC
Slicing Direction :  transverse
Slice Thickness :  0.15  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Imaris
Date of Deposition :  2022-04-20
Date of Upload :  2022-05-11
Persistence Vector :  SLC13A5_Cortex_Tg3-1.pvec

Reference Article
Related Article Reference :  SLC13A5/sodium-citrate co-transporter overexpression causes disrupted white matter integrity and an autistic-like phenotype.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  390
Number of Branches :  782
Overall Width :  1.3 μm
Overall Height :  200.32 μm
Overall Depth :  187.2 μm
Average Diameter :  1.32 μm
Total Length :  2215.34 μm
Total Surface :  9628.29 μm2
Total Volume :  3548.2 μm3
Max Euclidean Distance :  143.03 μm
Max Path Distance :  162.87 μm
Max Branch Order :  74
Average Contraction :  0.95
Total Fragmentation :  7480
Partition Asymmetry :  0.9
Average Rall's Ratio :  1.87
Average Bifurcation Angle Local :  87.26°
Average Bifurcation Angle Remote :  84.8°
Fractal Dimension :  1.03

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