8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_183727
Cell Name :  SLC13A5_Cortex_Tg1-4
Archive Name :  Puglielli
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  17.5 days
Max Age :  18.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Imaris.ims
Experiment Protocol :  culture
Experimental Condition :  Camk2a-tTA;TRE-SLC13A5
Staining Method :  immunostaining, phalloidin-TRITC
Slicing Direction :  transverse
Slice Thickness :  0.15  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Imaris
Date of Deposition :  2022-04-20
Date of Upload :  2022-05-11
Persistence Vector :  SLC13A5_Cortex_Tg1-4.pvec

Reference Article
Related Article Reference :  SLC13A5/sodium-citrate co-transporter overexpression causes disrupted white matter integrity and an autistic-like phenotype.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  99
Number of Branches :  199
Overall Width :  6.79 μm
Overall Height :  124.55 μm
Overall Depth :  112.65 μm
Average Diameter :  1.52 μm
Total Length :  1445.56 μm
Total Surface :  6895.01 μm2
Total Volume :  2644.49 μm3
Max Euclidean Distance :  130.77 μm
Max Path Distance :  156.92 μm
Max Branch Order :  28
Average Contraction :  0.96
Total Fragmentation :  3551
Partition Asymmetry :  0.67
Average Rall's Ratio :  1.94
Average Bifurcation Angle Local :  47.9°
Average Bifurcation Angle Remote :  50.36°
Fractal Dimension :  1.02

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