8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_182195
Cell Name :  SCGN_52
Archive Name :  Raju_Oldham
Species Name :  mouse
Strain :  Vip-Cre; R26-Ai14
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  50.0 days
Max Age :  50.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual
Primary Cell Class :  interneuron
Secondary Cell Class :  GABAergic
Tertiary Cell Class :  Vasoactive Intestinal Peptide (VIP)-positive
Original Format :  Neurolucida.dat
Experiment Protocol :  in vivo
Experimental Condition :  calcium-binding protein secretagogin (SCGN) expression
Staining Method :  green fluorescent protein
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  Not reported
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-03-30
Date of Upload :  2022-04-20
Persistence Vector :  SCGN_52.pvec
Note :  The ventricular and subventricular zones of E14.5 CGE (Vip-Cre and R26-Ai14) were dissected from donor embryos. Dissociated cells were infected with lenti-Gfp-SCGN virus and injected cells into the cortex. Cells were visualized by GFP and tdTomato and imaged by confocal microscopy.

Reference Article
Related Article Reference :  Secretagogin is Expressed by Developing Neocortical GABAergic Neurons in Humans but not Mice and Increases Neurite Arbor Size and Complexity.

Measurements
Soma Surface :  3570.65 μm2
Number of Stems :  3
Number of Bifurcations :  25
Number of Branches :  53
Overall Width :  778.35 μm
Overall Height :  803.3 μm
Overall Depth :  15 μm
Average Diameter :  0.63 μm
Total Length :  5513.91 μm
Total Surface :  10913.1 μm2
Total Volume :  1718.82 μm3
Max Euclidean Distance :  617.9 μm
Max Path Distance :  668.55 μm
Max Branch Order :  7
Average Contraction :  0.94
Total Fragmentation :  582
Partition Asymmetry :  0.29
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  54.82°
Average Bifurcation Angle Remote :  47.9°
Fractal Dimension :  1.01

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