8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_275819
Cell Name :  SC-12
Archive Name :  Xie_Gao
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.5 months
Max Age :  3.5 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  superior colliculus
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  spinal-projecting
Original Format :  Amira.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  25x
Reconstruction Method :  Amira
Date of Deposition :  2023-11-07
Date of Upload :  2024-03-01
Persistence Vector :  SC-12.pvec

Reference Article
Related Article Reference :  Morphological analysis of descending tracts in mouse spinal cord using tissue clearing, tissue expansion and tiling light sheet microscopy techniques.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  14
Number of Branches :  29
Overall Width :  344.79 μm
Overall Height :  3371.95 μm
Overall Depth :  222.68 μm
Average Diameter :  1 μm
Total Length :  5451.27 μm
Total Surface :  17127.8 μm2
Total Volume :  4282.48 μm3
Max Euclidean Distance :  3495.42 μm
Max Path Distance :  3968.63 μm
Max Branch Order :  9
Average Contraction :  0.91
Total Fragmentation :  424
Partition Asymmetry :  0.56
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  74.62°
Average Bifurcation Angle Remote :  78.39°
Fractal Dimension :  1.02

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