8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_275780
Cell Name :  SC-11
Archive Name :  Xie_Gao
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.5 months
Max Age :  3.5 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  superior colliculus
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  spinal-projecting
Original Format :  Amira.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  25x
Reconstruction Method :  Amira
Date of Deposition :  2023-11-07
Date of Upload :  2024-03-01
Persistence Vector :  SC-11.pvec

Reference Article
Related Article Reference :  Morphological analysis of descending tracts in mouse spinal cord using tissue clearing, tissue expansion and tiling light sheet microscopy techniques.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  15
Number of Branches :  31
Overall Width :  892.48 μm
Overall Height :  1476.43 μm
Overall Depth :  326.42 μm
Average Diameter :  1 μm
Total Length :  4049.84 μm
Total Surface :  12725.6 μm2
Total Volume :  3182.08 μm3
Max Euclidean Distance :  1646.96 μm
Max Path Distance :  2105.38 μm
Max Branch Order :  14
Average Contraction :  0.93
Total Fragmentation :  250
Partition Asymmetry :  0.86
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  93.92°
Average Bifurcation Angle Remote :  84.55°
Fractal Dimension :  1.02

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