8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_28247
Cell Name :  RatS1-3-34
Archive Name :  Franca
Species Name :  rat
Strain :  Wistar
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  primary somatosensory, layer 5-6
Primary Cell Class :  interneuron
Secondary Cell Class :  Nitrergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  200  μm
Tissue Shrinkage :  Reported (no values given)
Not corrected
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2014-03-22
Date of Upload :  2015-05-13
Persistence Vector :  RatS1-3-34.pvec
Note :  Original files received from the author contains cortical boundaries which may allow inference of barrel or septal columns.

Reference Article
Related Article Reference :  Distribution and morphology of nitrergic neurons across functional domains of the rat primary somatosensory cortex.

Measurements
Soma Surface :  726.04 μm2
Number of Stems :  4
Number of Bifurcations :  3
Number of Branches :  10
Overall Width :  121.51 μm
Overall Height :  152.74 μm
Overall Depth :  6.87 μm
Average Diameter :  0.55 μm
Total Length :  468.98 μm
Total Surface :  808.78 μm2
Total Volume :  173.97 μm3
Max Euclidean Distance :  93.33 μm
Max Path Distance :  105.61 μm
Max Branch Order :  2
Average Contraction :  0.95
Total Fragmentation :  80
Partition Asymmetry :  0.33
Average Rall's Ratio :  0.56
Average Bifurcation Angle Local :  63.83°
Average Bifurcation Angle Remote :  60.95°
Fractal Dimension :  1.01

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