8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_181601
Cell Name :  RI0727_Mid1_SRFinal_annot
Archive Name :  Richards
Species Name :  mouse
Strain :  Rem2+/+
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  16.0 days
Max Age :  16.0 days
Gender :  Male
Min Weight :  8.1 grams
Max Weight :  11.9 grams
Development :  young adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, medial, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Knossos.xml
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Knossos
Date of Deposition :  2021-10-21
Date of Upload :  2022-03-14
Persistence Vector :  RI0727_Mid1_SRFinal_annot.pvec
Note :  This reconstruction was obtained from a typically-reared (TR) littermate mouse. TR littermate mice were housed in a 12 h light/12 h dark cycle from birth until the specified age. Only basal dendrites were reconstructed.

Reference Article
Related Article Reference :  Experience-Dependent Development of Dendritic Arbors in Mouse Visual Cortex.

Measurements
Soma Surface :  470.01 μm2
Number of Stems :  3
Number of Bifurcations :  38
Number of Branches :  79
Overall Width :  235.02 μm
Overall Height :  245.55 μm
Overall Depth :  43.43 μm
Average Diameter :  2 μm
Total Length :  3425.28 μm
Total Surface :  21521.7 μm2
Total Volume :  10760.8 μm3
Max Euclidean Distance :  196.99 μm
Max Path Distance :  236.67 μm
Max Branch Order :  9
Average Contraction :  0.94
Total Fragmentation :  525
Partition Asymmetry :  0.34
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  74.85°
Average Bifurcation Angle Remote :  74.96°
Fractal Dimension :  1.02

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