8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_181158
Cell Name :  RI0400_Ant3_Final_annotat
Archive Name :  Richards
Species Name :  mouse
Strain :  Rem2+/+
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  30.0 days
Max Age :  30.0 days
Gender :  Female
Min Weight :  14.9 grams
Max Weight :  16.8 grams
Development :  young adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, anterior visual, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Knossos.xml
Experiment Protocol :  in vitro
Experimental Condition :  Dark reared
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Knossos
Date of Deposition :  2021-10-21
Date of Upload :  2022-03-14
Persistence Vector :  RI0400_Ant3_Final_annotat.pvec
Note :  This reconstruction was obtained from a dark-reared (DR) littermate mouse. DR littermate mice were placed in a light-tight box beginning at P9 until the termination of the experiment. Only basal dendrites were reconstructed.

Reference Article
Related Article Reference :  Experience-Dependent Development of Dendritic Arbors in Mouse Visual Cortex.

Measurements
Soma Surface :  2013.45 μm2
Number of Stems :  5
Number of Bifurcations :  17
Number of Branches :  39
Overall Width :  214.05 μm
Overall Height :  445.11 μm
Overall Depth :  40.04 μm
Average Diameter :  2 μm
Total Length :  2241.91 μm
Total Surface :  14086.3 μm2
Total Volume :  7043.17 μm3
Max Euclidean Distance :  320.93 μm
Max Path Distance :  339.95 μm
Max Branch Order :  3
Average Contraction :  0.94
Total Fragmentation :  310
Partition Asymmetry :  0.28
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  56.07°
Average Bifurcation Angle Remote :  51.4°
Fractal Dimension :  1.02

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