8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_181147
Cell Name :  RI0099_Mid1_Final_annotat
Archive Name :  Richards
Species Name :  mouse
Strain :  Rem2-/-
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  7.0 days
Max Age :  7.0 days
Gender :  Female
Min Weight :  7.5 grams
Max Weight :  7.5 grams
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, medial, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Knossos.xml
Experiment Protocol :  in vitro
Experimental Condition :  Rem2 knockout
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Knossos
Date of Deposition :  2021-10-21
Date of Upload :  2022-03-14
Persistence Vector :  RI0099_Mid1_Final_annotat.pvec
Note :  This reconstruction was obtained from a typically-reared (TR) littermate mouse. TR littermate mice were housed in a 12 h light/12 h dark cycle from birth until the specified age. Only basal dendrites were reconstructed.

Reference Article
Related Article Reference :  Experience-Dependent Development of Dendritic Arbors in Mouse Visual Cortex.

Measurements
Soma Surface :  878.09 μm2
Number of Stems :  8
Number of Bifurcations :  13
Number of Branches :  34
Overall Width :  148.25 μm
Overall Height :  197.86 μm
Overall Depth :  22.24 μm
Average Diameter :  2 μm
Total Length :  1320.87 μm
Total Surface :  8299.24 μm2
Total Volume :  4149.62 μm3
Max Euclidean Distance :  139.75 μm
Max Path Distance :  149.96 μm
Max Branch Order :  3
Average Contraction :  0.92
Total Fragmentation :  224
Partition Asymmetry :  0.36
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  69.63°
Average Bifurcation Angle Remote :  61.69°
Fractal Dimension :  1.02

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website