8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_181659
Cell Name :  RI0099_Ant1_Final_annotat
Archive Name :  Richards
Species Name :  mouse
Strain :  Rem2-/-
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  7.0 days
Max Age :  7.0 days
Gender :  Female
Min Weight :  7.5 grams
Max Weight :  7.5 grams
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, anterior visual, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Knossos.xml
Experiment Protocol :  in vitro
Experimental Condition :  Rem2 knockout
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Knossos
Date of Deposition :  2021-10-21
Date of Upload :  2022-03-14
Persistence Vector :  RI0099_Ant1_Final_annotat.pvec
Note :  This reconstruction was obtained from a typically-reared (TR) littermate mouse. TR littermate mice were housed in a 12 h light/12 h dark cycle from birth until the specified age. Only basal dendrites were reconstructed.

Reference Article
Related Article Reference :  Experience-Dependent Development of Dendritic Arbors in Mouse Visual Cortex.

Measurements
Soma Surface :  736.52 μm2
Number of Stems :  8
Number of Bifurcations :  12
Number of Branches :  32
Overall Width :  174.3 μm
Overall Height :  219.58 μm
Overall Depth :  21.98 μm
Average Diameter :  2 μm
Total Length :  1632.44 μm
Total Surface :  10256.9 μm2
Total Volume :  5128.45 μm3
Max Euclidean Distance :  198.82 μm
Max Path Distance :  219.46 μm
Max Branch Order :  4
Average Contraction :  0.89
Total Fragmentation :  281
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  72.45°
Average Bifurcation Angle Remote :  66.17°
Fractal Dimension :  1.03

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