8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_181148
Cell Name :  RI0078_Post4_SRFinal_anno
Archive Name :  Richards
Species Name :  mouse
Strain :  Rem2-/-
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  12.0 days
Max Age :  12.0 days
Gender :  Male
Min Weight :  5.9 grams
Max Weight :  5.9 grams
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, layer 2-3, posterior
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Knossos.xml
Experiment Protocol :  in vitro
Experimental Condition :  Rem2 knockout
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Knossos
Date of Deposition :  2021-10-21
Date of Upload :  2022-03-14
Persistence Vector :  RI0078_Post4_SRFinal_anno.pvec
Note :  This reconstruction was obtained from a typically-reared (TR) littermate mouse. TR littermate mice were housed in a 12 h light/12 h dark cycle from birth until the specified age. Only basal dendrites were reconstructed.

Reference Article
Related Article Reference :  Experience-Dependent Development of Dendritic Arbors in Mouse Visual Cortex.

Measurements
Soma Surface :  424.1 μm2
Number of Stems :  8
Number of Bifurcations :  9
Number of Branches :  26
Overall Width :  280.41 μm
Overall Height :  335.42 μm
Overall Depth :  27.89 μm
Average Diameter :  2 μm
Total Length :  1867.22 μm
Total Surface :  11732.1 μm2
Total Volume :  5866.04 μm3
Max Euclidean Distance :  216.65 μm
Max Path Distance :  239.69 μm
Max Branch Order :  3
Average Contraction :  0.93
Total Fragmentation :  285
Partition Asymmetry :  0.33
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  75.38°
Average Bifurcation Angle Remote :  70.52°
Fractal Dimension :  1.02

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