8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_181168
Cell Name :  RI0058_Mid2_SRFinal_annot
Archive Name :  Richards
Species Name :  mouse
Strain :  Rem2+/+
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  16.0 days
Max Age :  16.0 days
Gender :  Female
Min Weight :  9.8 grams
Max Weight :  9.8 grams
Development :  young adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, medial, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Knossos.xml
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Golgi-Cox
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Knossos
Date of Deposition :  2021-10-21
Date of Upload :  2022-03-14
Persistence Vector :  RI0058_Mid2_SRFinal_annot.pvec
Note :  This reconstruction was obtained from a typically-reared (TR) littermate mouse. TR littermate mice were housed in a 12 h light/12 h dark cycle from birth until the specified age. Only basal dendrites were reconstructed.

Reference Article
Related Article Reference :  Experience-Dependent Development of Dendritic Arbors in Mouse Visual Cortex.

Measurements
Soma Surface :  1217.22 μm2
Number of Stems :  6
Number of Bifurcations :  14
Number of Branches :  34
Overall Width :  284.62 μm
Overall Height :  249.7 μm
Overall Depth :  29.87 μm
Average Diameter :  2 μm
Total Length :  2006.71 μm
Total Surface :  12608.6 μm2
Total Volume :  6304.28 μm3
Max Euclidean Distance :  233.22 μm
Max Path Distance :  254.64 μm
Max Branch Order :  4
Average Contraction :  0.89
Total Fragmentation :  276
Partition Asymmetry :  0.36
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  68.96°
Average Bifurcation Angle Remote :  56.06°
Fractal Dimension :  1.03

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