8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_72989
Cell Name :  R99a-40x-cel5
Archive Name :  DeFelipe
Species Name :  mouse
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  lucifer yellow
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-06-15
Date of Upload :  2017-11-28
Persistence Vector :  R99a-40x-cel5.pvec
Note :  Lucifer yellow was intracellularly injected.

Reference Article
Related Article Reference :  Specific cytoarchitectureal changes in hippocampal subareas in daDREAM mice.

Measurements
Soma Surface :  796.54 μm2
Number of Stems :  4
Number of Bifurcations :  43
Number of Branches :  90
Overall Width :  159.48 μm
Overall Height :  375.88 μm
Overall Depth :  126.66 μm
Average Diameter :  0.36 μm
Total Length :  5011.45 μm
Total Surface :  5542.81 μm2
Total Volume :  1415.17 μm3
Max Euclidean Distance :  270.23 μm
Max Path Distance :  341.61 μm
Max Branch Order :  16
Average Contraction :  0.86
Total Fragmentation :  1605
Partition Asymmetry :  0.59
Average Rall's Ratio :  1.4
Average Bifurcation Angle Local :  72.28°
Average Bifurcation Angle Remote :  53.81°
Fractal Dimension :  1.04

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