8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_125604
Cell Name :  R841X-C_DMSO_332
Archive Name :  Ellis
Species Name :  human
Strain :  Not applicable
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  induced pluripotent stem cell-(iPSC)-derived
Tertiary Cell Class :  Excitatory
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  DMSO
Staining Method :  Not reported
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2019-12-11
Date of Upload :  2020-06-29
Persistence Vector :  R841X-C_DMSO_332.pvec
Note :  SHANK2 R841X (SK0441-003), 9-week-old in vitro iPSC-derived

Reference Article
Related Article Reference :  SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  2
Number of Branches :  5
Overall Width :  26.86 μm
Overall Height :  148.02 μm
Overall Depth :  0 μm
Average Diameter :  0.25 μm
Total Length :  215.07 μm
Total Surface :  168.91 μm2
Total Volume :  10.56 μm3
Max Euclidean Distance :  158.01 μm
Max Path Distance :  166.88 μm
Max Branch Order :  2
Average Contraction :  0.96
Total Fragmentation :  275
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  60.78°
Average Bifurcation Angle Remote :  22.08°
Fractal Dimension :  1.02

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