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Details about selected cell |
NeuroMorpho.Org ID : | NMO_148602 |
Cell Name : | R16_PFC_S1_C2 |
Archive Name : | Hof_Varghese |
Species Name : | rat |
Strain : | Sprague-Dawley |
Structural Domains : | Dendrites, Soma, No Axon |
Physical Integrity : | Dendrites Moderate |
Morphological Attributes : | No Diameter, 3D, Angles |
Min Age : | 35.0 days
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Max Age : | 35.0 days
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Gender : |
Female
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Min Weight : | 130 grams
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Max Weight : | 130 grams
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Development : | adult |
Primary Brain Region : | neocortex |
Secondary Brain Region : | medial prefrontal |
Tertiary Brain Region : | layer 3 |
Primary Cell Class : | principal cell |
Secondary Cell Class : | pyramidal |
Tertiary Cell Class : | Not reported |
Original Format : | Neurolucida.dat |
Experiment Protocol : | in vitro |
Experimental Condition : | Shank3 knockout |
Staining Method : | lucifer yellow |
Slicing Direction : | coronal |
Slice Thickness : | 250
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | oil |
Magnification : | 40x |
Reconstruction Method : | Neurolucida |
Date of Deposition : | 2020-12-17 |
Date of Upload : | 2021-01-14 |
Persistence Vector : | R16_PFC_S1_C2.pvec |
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Reference Article |
Related Article Reference : | Altered synaptic ultrastructure in the prefrontal cortex of Shank3-deficient rats. |
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Measurements |
Soma Surface : |
594.54 μm2 |
Number of Stems : |
7 |
Number of Bifurcations : |
21 |
Number of Branches : |
49 |
Overall Width : |
135.19 μm |
Overall Height : |
270.86 μm |
Overall Depth : |
121.38 μm |
Average Diameter : |
0.19 μm |
Total Length : |
2644.84 μm |
Total Surface : |
1578.71 μm2 |
Total Volume : |
74.99 μm3 |
Max Euclidean Distance : |
292.31 μm |
Max Path Distance : |
432.03 μm |
Max Branch Order : |
6 |
Average Contraction : |
0.86 |
Total Fragmentation : |
693 |
Partition Asymmetry : |
0.32 |
Average Rall's Ratio : |
2 |
Average Bifurcation Angle Local : |
77.06° |
Average Bifurcation Angle Remote : |
75.39° |
Fractal Dimension : |
1.04 |
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