8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_282135
Cell Name :  Piper_sld5_sec2_63x_0_medial1_s_Ds
Archive Name :  Rautio_Whitlock
Species Name :  mouse
Strain :  C57BL/6JBomTac
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Female
Min Weight :  23 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  medial, extrastriate, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  secondary motor cortex (M2)-projecting
Original Format :  Neurolucida.dat
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  green fluorescent protein, immunostaining
Slicing Direction :  transverse
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Neurolucida
Date of Deposition :  2024-03-05
Date of Upload :  2024-03-18
Persistence Vector :  Piper_sld5_sec2_63x_0_medial1_s_Ds.pvec
Note :  M2 projecting neurons co-occurred with V1 output fibers in the anteromedial (AM), posteromedial (PM), rostrolateral (RL), and anterolateral (AL) extrastriate areas.

Reference Article
Related Article Reference :  Visuomotor interactions in the mouse forebrain mediated by extrastriate cortico-cortical pathways.

Measurements
Soma Surface :  1003.79 μm2
Number of Stems :  7
Number of Bifurcations :  10
Number of Branches :  27
Overall Width :  87.57 μm
Overall Height :  142.9 μm
Overall Depth :  7.58 μm
Average Diameter :  0.88 μm
Total Length :  695.06 μm
Total Surface :  2364.19 μm2
Total Volume :  852.52 μm3
Max Euclidean Distance :  107.95 μm
Max Path Distance :  122.29 μm
Max Branch Order :  4
Average Contraction :  0.92
Total Fragmentation :  1080
Partition Asymmetry :  0.43
Average Rall's Ratio :  1.49
Average Bifurcation Angle Local :  74.81°
Average Bifurcation Angle Remote :  83.22°
Fractal Dimension :  1.03

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