8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_117263
Cell Name :  PS19-microglia
Archive Name :  Zheng
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  9.0 months
Max Age :  9.0 months
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA3
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  PS19 Transgenic
Staining Method :  immunostaining
Slicing Direction :  Not reported
Slice Thickness :  40  μm
Tissue Shrinkage :  Reported 25%
Not corrected
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Imaris
Date of Deposition :  2019-05-28
Date of Upload :  2019-12-13
Persistence Vector :  PS19-microglia.pvec
Note :  The SWC units for this cell are expressed in pixels rather than in microns. Thus, the morphometric measurements can be compared within other cells within this archive, but not across the rest of the database.

Reference Article
Related Article Reference :  Complement C3aR Inactivation Attenuates Tau Pathology and Reverses an Immune Network Deregulated in Tauopathy Models and Alzheimer's Disease.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  138
Number of Branches :  278
Overall Width :  7.82 μm
Overall Height :  206.81 μm
Overall Depth :  146.72 μm
Average Diameter :  7.41 μm
Total Length :  3805.54 μm
Total Surface :  86896.6 μm2
Total Volume :  192829 μm3
Max Euclidean Distance :  151.89 μm
Max Path Distance :  168.73 μm
Max Branch Order :  20
Average Contraction :  0.92
Total Fragmentation :  4638
Partition Asymmetry :  0.57
Average Rall's Ratio :  2.48
Average Bifurcation Angle Local :  50°
Average Bifurcation Angle Remote :  48.87°
Fractal Dimension :  1.04

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