8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_72163
Cell Name :  P14_rat9_layerII_cell5
Archive Name :  DeFelipe
Species Name :  rat
Strain :  Wistar
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  14.0 days
Max Age :  14.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  layer 2
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  lucifer yellow
Slicing Direction :  parallel to the cortical surface
Slice Thickness :  200  μm
Tissue Shrinkage :  Reported (no values given)
Corrected 0.83% in xy, 0.83% in z
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-04-17
Date of Upload :  2017-11-28
Persistence Vector :  P14_rat9_layerII_cell5.pvec
Note :  Lucifer yellow was intracellularly injected.

Reference Articles
Primary Article Reference :  Laminar Differences in Dendritic Structure of Pyramidal Neurons in the Juvenile Rat Somatosensory Cortex.
Secondary Article Reference :  Dendritic branching angles of pyramidal cells across layers of the juvenile rat somatosensory cortex.
Secondary Article Reference :  Wiring Economy of Pyramidal Cells in the Juvenile Rat Somatosensory Cortex.

Measurements
Soma Surface :  6827.18 μm2
Number of Stems :  7
Number of Bifurcations :  28
Number of Branches :  63
Overall Width :  165.59 μm
Overall Height :  161.62 μm
Overall Depth :  65.14 μm
Average Diameter :  0.19 μm
Total Length :  2623.64 μm
Total Surface :  1566.06 μm2
Total Volume :  74.39 μm3
Max Euclidean Distance :  118.9 μm
Max Path Distance :  143.43 μm
Max Branch Order :  5
Average Contraction :  0.89
Total Fragmentation :  2377
Partition Asymmetry :  0.46
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  71.33°
Average Bifurcation Angle Remote :  51.44°
Fractal Dimension :  1.03

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