8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_282350
Cell Name :  Niiyama2023_Fig6_PLX_3
Archive Name :  Imai
Species Name :  mouse
Strain :  ICR
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  10.0 days
Max Age :  10.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  neocortex
Secondary Brain Region :  somatosensory
Tertiary Brain Region :  primary somatosensory, barrel, layer 4
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in utero
Experimental Condition :  Microglia depletion (PLX5622)
Staining Method :  td Tomato fluorescent protein
Slicing Direction :  tangential
Slice Thickness :  120  μm
Tissue Shrinkage :  Not reported
Objective Type :  glycerin
Magnification :  20x
Reconstruction Method :  Neurolucida
Date of Deposition :  2024-03-12
Date of Upload :  2024-03-20
Persistence Vector :  Niiyama2023_Fig6_PLX_3.pvec
Note :  PLX5622 was intraperitoneally injected at a dose of 50 mg/kg body weight once a day for consecutive days to pregnant mothers from embryonic day 12 to post-natal day 10 (pups).

Reference Article
Related Article Reference :  Microglia Are Dispensable for Developmental Dendrite Pruning of Mitral Cells in Mice.

Measurements
Soma Surface :  92261.8 μm2
Number of Stems :  4
Number of Bifurcations :  8
Number of Branches :  20
Overall Width :  50.44 μm
Overall Height :  97.55 μm
Overall Depth :  8.75 μm
Average Diameter :  1.04 μm
Total Length :  453.08 μm
Total Surface :  1558.69 μm2
Total Volume :  469.92 μm3
Max Euclidean Distance :  83.96 μm
Max Path Distance :  94.73 μm
Max Branch Order :  3
Average Contraction :  0.94
Total Fragmentation :  245
Partition Asymmetry :  0.38
Average Rall's Ratio :  1.41
Average Bifurcation Angle Local :  44.87°
Average Bifurcation Angle Remote :  44.84°
Fractal Dimension :  1.01

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