8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_68811
Cell Name :  Neuron_id0351
Archive Name :  Wanner_Friedrich
Species Name :  zebrafish
Strain :  wild type
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  4.5 days
Max Age :  4.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  main olfactory bulb
Secondary Brain Region :  glomeruli
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  mitral
Tertiary Cell Class :  Not reported
Original Format :  PyKNOSSOS.nmx
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium tetroxide/uranyl acetate
Slicing Direction :  Not reported
Slice Thickness :  0.025  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  PyKNOSSOS
Date of Deposition :  2016-01-01
Date of Upload :  2017-07-19
Persistence Vector :  Neuron_id0351.pvec
Note :  Image stacks available at http://neurodata.io/wanner16
 

Reference Articles
Primary Article Reference :  Dense EM-based reconstruction of the interglomerular projectome in the zebrafish olfactory bulb.
Secondary Article Reference :  3-dimensional electron microscopic imaging of the zebrafish olfactory bulb and dense reconstruction of neurons.

Measurements
Soma Surface :  146.28 μm2
Number of Stems :  11
Number of Bifurcations :  189
Number of Branches :  389
Overall Width :  44.51 μm
Overall Height :  88.25 μm
Overall Depth :  15.01 μm
Average Diameter :  1 μm
Total Length :  522.8 μm
Total Surface :  1642.48 μm2
Total Volume :  410.63 μm3
Max Euclidean Distance :  72.55 μm
Max Path Distance :  140.42 μm
Max Branch Order :  41
Average Contraction :  0.93
Total Fragmentation :  3159
Partition Asymmetry :  0.62
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  85.23°
Average Bifurcation Angle Remote :  92.55°
Fractal Dimension :  1.07

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