8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_69527
Cell Name :  Neuron_id0127
Archive Name :  Wanner_Friedrich
Species Name :  zebrafish
Strain :  wild type
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  4.5 days
Max Age :  4.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  main olfactory bulb
Secondary Brain Region :  glomeruli
Tertiary Brain Region :  Not reported
Primary Cell Class :  Not reported
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  PyKNOSSOS.nmx
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  osmium tetroxide/uranyl acetate
Slicing Direction :  Not reported
Slice Thickness :  0.025  μm
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  Not reported
Reconstruction Method :  PyKNOSSOS
Date of Deposition :  2016-01-01
Date of Upload :  2017-07-19
Persistence Vector :  Neuron_id0127.pvec
Note :  Image stacks available at http://neurodata.io/wanner16
 

Reference Articles
Primary Article Reference :  Dense EM-based reconstruction of the interglomerular projectome in the zebrafish olfactory bulb.
Secondary Article Reference :  3-dimensional electron microscopic imaging of the zebrafish olfactory bulb and dense reconstruction of neurons.

Measurements
Soma Surface :  123.88 μm2
Number of Stems :  8
Number of Bifurcations :  45
Number of Branches :  98
Overall Width :  19.34 μm
Overall Height :  11.94 μm
Overall Depth :  5.8 μm
Average Diameter :  1 μm
Total Length :  170.32 μm
Total Surface :  535.08 μm2
Total Volume :  133.77 μm3
Max Euclidean Distance :  15.84 μm
Max Path Distance :  46.44 μm
Max Branch Order :  24
Average Contraction :  0.93
Total Fragmentation :  929
Partition Asymmetry :  0.67
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  87.49°
Average Bifurcation Angle Remote :  85.59°
Fractal Dimension :  1.05

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