8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_239153
Cell Name :  Navid-VTA-PBP-151103-4
Archive Name :  Henny_Roeper
Species Name :  mouse
Strain :  C57BL/6N
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  3.0 months
Max Age :  5.0 months
Gender :  Male
Min Weight :  25 grams
Max Weight :  30 grams
Development :  adult
Primary Brain Region :  mesencephalon
Secondary Brain Region :  midbrain tegmentum
Tertiary Brain Region :  Ventral Tegmental Area
Primary Cell Class :  principal cell
Secondary Cell Class :  dopaminergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Neurobiotin
Slicing Direction :  coronal
Slice Thickness :  40  μm
Tissue Shrinkage :  Reported 34%
Corrected (no values given)
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Neurolucida
Date of Deposition :  2022-09-05
Date of Upload :  2022-09-28
Persistence Vector :  Navid-VTA-PBP-151103-4.pvec
Note :  This cell was reconstructed in the Roeper lab. Tissue shrinkage was corrected to 40µm.

Reference Article
Related Article Reference :  Dendritic Architecture Predicts in vivo Firing Pattern in Mouse Ventral Tegmental Area and Substantia Nigra Dopaminergic Neurons.

Measurements
Soma Surface :  1001.5 μm2
Number of Stems :  4
Number of Bifurcations :  21
Number of Branches :  46
Overall Width :  779.1 μm
Overall Height :  753.59 μm
Overall Depth :  278.77 μm
Average Diameter :  0.82 μm
Total Length :  7711.09 μm
Total Surface :  20018.3 μm2
Total Volume :  5025.84 μm3
Max Euclidean Distance :  697.85 μm
Max Path Distance :  2428.22 μm
Max Branch Order :  6
Average Contraction :  0.85
Total Fragmentation :  5475
Partition Asymmetry :  0.43
Average Rall's Ratio :  1.76
Average Bifurcation Angle Local :  69.86°
Average Bifurcation Angle Remote :  57.92°
Fractal Dimension :  1.04

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