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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_109407 |
| Cell Name : | N003_1 |
| Archive Name : | Luo |
| Species Name : | mouse |
| Strain : | Chat-IRES-Cre:Ai47 |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Moderate, Axon Incomplete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 2.0 days
|
| Max Age : | 6.0 days
|
| Gender : |
Female
|
| Min Weight : | 26.41 grams
|
| Max Weight : | 26.41 grams
|
| Development : | adult |
| Primary Brain Region : | basal forebrain |
| Secondary Brain Region : | medial septum |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | cholinergic |
| Tertiary Cell Class : | projection |
| Original Format : | Amira.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | green fluorescent protein |
| Slicing Direction : | coronal |
| Slice Thickness : | 1
μm |
| Tissue Shrinkage : |
Reported (no values given)
Not corrected
|
| Objective Type : | water |
| Magnification : | 40x |
| Reconstruction Method : | Amira |
| Date of Deposition : | 2019-02-23 |
| Date of Upload : | 2019-08-19 |
| Persistence Vector : | N003_1.pvec |
| Note : | Basal forebrain somatic location includes the vertical limb of the diagonal band nucleus (VDB). Injected with Cre-dependent AAV-CAG-flex-GFP virus. Morphology File (Original) registered to Common Coordinate Framework. |
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| Reference Article |
| Related Article Reference : | Generation of a whole-brain atlas for the cholinergic system and mesoscopic projectome analysis of basal forebrain cholinergic neurons. |
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|
| Measurements |
| Soma Surface : |
1365.02 μm2 |
| Number of Stems : |
6 |
| Number of Bifurcations : |
94 |
| Number of Branches : |
194 |
| Overall Width : |
5546.99 μm |
| Overall Height : |
4519.57 μm |
| Overall Depth : |
5526.74 μm |
| Average Diameter : |
0.46 μm |
| Total Length : |
55201.5 μm |
| Total Surface : |
79773.5 μm2 |
| Total Volume : |
9173.96 μm3 |
| Max Euclidean Distance : |
6946.2 μm |
| Max Path Distance : |
14900.4 μm |
| Max Branch Order : |
15 |
| Average Contraction : |
0.8 |
| Total Fragmentation : |
13847 |
| Partition Asymmetry : |
0.51 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
68.26° |
| Average Bifurcation Angle Remote : |
74.33° |
| Fractal Dimension : |
1.05 |
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