8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_284628
Cell Name :  MsJinx16_NoFlicker_1h_IBA1_NFkBinh_17
Archive Name :  Prichard_Singer
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Male
Min Weight :  30 grams
Max Weight :  30 grams
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, right
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  NF-kB inhibitor
Staining Method :  immunostaining
Slicing Direction :  Sagittal
Slice Thickness :  40  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x , 40x
Reconstruction Method :  Imaris
Date of Deposition :  2023-07-28
Date of Upload :  2024-07-30
Persistence Vector :  MsJinx16_NoFlicker_1h_IBA1_NFkBinh_17.pvec
Note :  The NF-κB pathway was inhibited using inhibitor of NF-kB kinase inhibitor (IMD0354 at 10 mg/kg) combined with curcumin (S1848 at 100 mg/kg). All drugs were solubilized in vehicle consisting of dimethyl sulfoxide, polyethylene glycol, polysorbate 20 (Tween 20), and sterile physiologic saline. Drugs were delivered via intraperitoneal injection after the start of 1 hour of no flicker stimulation.

Reference Article
Related Article Reference :  Brain rhythms control microglial response and cytokine expression via NF-κB signaling.

Measurements
Soma Surface :  233.1 μm2
Number of Stems :  12
Number of Bifurcations :  69
Number of Branches :  150
Overall Width :  11.14 μm
Overall Height :  44.6 μm
Overall Depth :  37.49 μm
Average Diameter :  1 μm
Total Length :  687.05 μm
Total Surface :  2145.72 μm2
Total Volume :  670.23 μm3
Max Euclidean Distance :  31.52 μm
Max Path Distance :  77.35 μm
Max Branch Order :  13
Average Contraction :  0.89
Total Fragmentation :  2448
Partition Asymmetry :  0.61
Average Rall's Ratio :  2.04
Average Bifurcation Angle Local :  52.2°
Average Bifurcation Angle Remote :  64.72°
Fractal Dimension :  1.05

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