8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_284131
Cell Name :  MsJinx16_NoFlicker_1h_IBA1_NFkBinh_14
Archive Name :  Prichard_Singer
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Male
Min Weight :  30 grams
Max Weight :  30 grams
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, right
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  NF-kB inhibitor
Staining Method :  immunostaining
Slicing Direction :  Sagittal
Slice Thickness :  40  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x , 40x
Reconstruction Method :  Imaris
Date of Deposition :  2023-07-28
Date of Upload :  2024-07-30
Persistence Vector :  MsJinx16_NoFlicker_1h_IBA1_NFkBinh_14.pvec
Note :  The NF-κB pathway was inhibited using inhibitor of NF-kB kinase inhibitor (IMD0354 at 10 mg/kg) combined with curcumin (S1848 at 100 mg/kg). All drugs were solubilized in vehicle consisting of dimethyl sulfoxide, polyethylene glycol, polysorbate 20 (Tween 20), and sterile physiologic saline. Drugs were delivered via intraperitoneal injection after the start of 1 hour of no flicker stimulation.

Reference Article
Related Article Reference :  Brain rhythms control microglial response and cytokine expression via NF-κB signaling.

Measurements
Soma Surface :  57.45 μm2
Number of Stems :  4
Number of Bifurcations :  13
Number of Branches :  30
Overall Width :  7.95 μm
Overall Height :  39.31 μm
Overall Depth :  28.91 μm
Average Diameter :  0.86 μm
Total Length :  169.22 μm
Total Surface :  468.74 μm2
Total Volume :  127.04 μm3
Max Euclidean Distance :  30.36 μm
Max Path Distance :  41.12 μm
Max Branch Order :  4
Average Contraction :  0.87
Total Fragmentation :  698
Partition Asymmetry :  0.46
Average Rall's Ratio :  2.46
Average Bifurcation Angle Local :  49.75°
Average Bifurcation Angle Remote :  83.03°
Fractal Dimension :  1.06

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