8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_139031
Cell Name :  Molofsky_16
Archive Name :  Molofsky
Species Name :  mouse
Strain :  Il1rl1flox/flox:Cx3cr1CreER
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  2.0 months
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  granule layer
Primary Cell Class :  principal cell
Secondary Cell Class :  granule
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  in vivo
Experimental Condition :  conditional deletion of Il1rl1
Staining Method :  AAV + eGFP
Slicing Direction :  coronal
Slice Thickness :  60  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-08-04
Date of Upload :  2020-08-21
Persistence Vector :  Molofsky_16.pvec
Note :  Reconstruction was obtained from a mouse with conditional deletion of Il1rl1 in microglia (used in studies referring to IL1RL1 i-cKO).

Reference Article
Related Article Reference :  Microglial Remodeling of the Extracellular Matrix Promotes Synapse Plasticity.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  10
Number of Branches :  22
Overall Width :  110.9 μm
Overall Height :  156.98 μm
Overall Depth :  11.26 μm
Average Diameter :  0.25 μm
Total Length :  939.96 μm
Total Surface :  738.25 μm2
Total Volume :  46.14 μm3
Max Euclidean Distance :  177.46 μm
Max Path Distance :  215.89 μm
Max Branch Order :  5
Average Contraction :  0.86
Total Fragmentation :  4650
Partition Asymmetry :  0.23
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  81.82°
Average Bifurcation Angle Remote :  43.96°
Fractal Dimension :  1.05

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