8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_275798
Cell Name :  Med-9
Archive Name :  Xie_Gao
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.5 months
Max Age :  3.5 months
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  cerebellum
Secondary Brain Region :  deep cerebellar nuclei
Tertiary Brain Region :  medial nucleus
Primary Cell Class :  principal cell
Secondary Cell Class :  projection
Tertiary Cell Class :  spinal-projecting
Original Format :  Amira.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  Not reported
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  25x
Reconstruction Method :  Amira
Date of Deposition :  2023-11-07
Date of Upload :  2024-03-01
Persistence Vector :  Med-9.pvec

Reference Article
Related Article Reference :  Morphological analysis of descending tracts in mouse spinal cord using tissue clearing, tissue expansion and tiling light sheet microscopy techniques.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  61
Number of Branches :  124
Overall Width :  1383.91 μm
Overall Height :  7453.95 μm
Overall Depth :  393.76 μm
Average Diameter :  1 μm
Total Length :  22106.2 μm
Total Surface :  69420 μm2
Total Volume :  17355.6 μm3
Max Euclidean Distance :  8396.65 μm
Max Path Distance :  8780.96 μm
Max Branch Order :  17
Average Contraction :  0.91
Total Fragmentation :  970
Partition Asymmetry :  0.6
Average Rall's Ratio :  2.23
Average Bifurcation Angle Local :  81.56°
Average Bifurcation Angle Remote :  76.83°
Fractal Dimension :  1.02

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