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Details about selected cell |
NeuroMorpho.Org ID : | NMO_87658 |
Cell Name : | MeLm_R_4965 |
Archive Name : | Hildebrand |
Species Name : | zebrafish |
Strain : | Tg(elavl3:GCaMP5G)a4598 transgenic |
Structural Domains : | Neurites, Soma |
Physical Integrity : | Neurites Moderate |
Morphological Attributes : | No Diameter, 3D, Angles |
Min Age : | 5.5 days
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Max Age : | 5.5 days
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Gender : |
Not reported
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | larval |
Primary Brain Region : | brainstem |
Secondary Brain Region : | hindbrain |
Tertiary Brain Region : | reticular formation, nucleus of medial longitudinal fasciculus, Medial longitudinal fasciculus, right, ventral |
Primary Cell Class : | principal cell |
Secondary Cell Class : | myelinated |
Tertiary Cell Class : | Reticulospinal, ipsilaterally-projecting, MeLM |
Original Format : | Catmaid.swc |
Experiment Protocol : | in vitro |
Experimental Condition : | Control |
Staining Method : | osmium tetroxide/uranyl acetate |
Slicing Direction : | perpendicular to the long axis |
Slice Thickness : | 0.06
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | electron microscopy |
Magnification : | Not reported
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Reconstruction Method : | Catmaid |
Date of Deposition : | 2017-09-15 |
Date of Upload : | 2018-04-16 |
Persistence Vector : | MeLm_R_4965.pvec |
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Reference Article |
Related Article Reference : | Whole-brain serial-section electron microscopy in larval zebrafish. |
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Measurements |
Soma Surface : |
70.17 μm2 |
Number of Stems : |
2 |
Number of Bifurcations : |
3 |
Number of Branches : |
8 |
Overall Width : |
16.26 μm |
Overall Height : |
536.77 μm |
Overall Depth : |
42.35 μm |
Average Diameter : |
0.25 μm |
Total Length : |
894.74 μm |
Total Surface : |
702.73 μm2 |
Total Volume : |
43.92 μm3 |
Max Euclidean Distance : |
549.5 μm |
Max Path Distance : |
795.83 μm |
Max Branch Order : |
2 |
Average Contraction : |
0.69 |
Total Fragmentation : |
5832 |
Partition Asymmetry : |
0.33 |
Average Rall's Ratio : |
2 |
Average Bifurcation Angle Local : |
163.2° |
Average Bifurcation Angle Remote : |
102.37° |
Fractal Dimension : |
1.16 |
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