8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_140479
Cell Name :  Lee_LJ_3-1-3
Archive Name :  Lee_LJ
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  35.0 days
Max Age :  35.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  molecular layer
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vivo
Experimental Condition :  sleep deprivation (SD)
Staining Method :  Golgi
Slicing Direction :  transverse
Slice Thickness :  30  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-09-13
Date of Upload :  2020-10-06
Persistence Vector :  Lee_LJ_3-1-3.pvec
Note :  This reconstruction was obtained from an animal considered as an adolescent (5 weeks old). SD for 72h was induced using a modified multiple-platform method in a water tank.

Reference Article
Related Article Reference :  Microglia-mediated synaptic pruning is impaired in sleep-deprived adolescent mice.

Measurements
Soma Surface :  287.21 μm2
Number of Stems :  6
Number of Bifurcations :  20
Number of Branches :  46
Overall Width :  59.71 μm
Overall Height :  39.4 μm
Overall Depth :  5.97 μm
Average Diameter :  0.25 μm
Total Length :  452.64 μm
Total Surface :  355.5 μm2
Total Volume :  22.22 μm3
Max Euclidean Distance :  37.77 μm
Max Path Distance :  55.49 μm
Max Branch Order :  4
Average Contraction :  0.79
Total Fragmentation :  760
Partition Asymmetry :  0.45
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  88.92°
Average Bifurcation Angle Remote :  84.47°
Fractal Dimension :  1.11

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