8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_165528
Cell Name :  L2_18864_3982_x4568_y1626
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Cux2-CreERT2;Ai166
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Intratelencephalic (IT)
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  L2_18864_3982_x4568_y1626.pvec
Note :  This reconstruction was obtained from the SEU-ALLEN Joint Center, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  25.13 μm2
Number of Stems :  8
Number of Bifurcations :  315
Number of Branches :  638
Overall Width :  4060 μm
Overall Height :  3466.26 μm
Overall Depth :  4449.91 μm
Average Diameter :  2 μm
Total Length :  100886 μm
Total Surface :  633883 μm2
Total Volume :  316942 μm3
Max Euclidean Distance :  3694.02 μm
Max Path Distance :  5545.29 μm
Max Branch Order :  27
Average Contraction :  0.89
Total Fragmentation :  13803
Partition Asymmetry :  0.59
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  74.6°
Average Bifurcation Angle Remote :  68.92°
Fractal Dimension :  1.02

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