8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_73006
Cell Name :  J26_WTII_n50_CA1_basal_cel1
Archive Name :  DeFelipe
Species Name :  mouse
Strain :  Wildtype
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  not reported
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  lucifer yellow
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-06-15
Date of Upload :  2017-11-28
Persistence Vector :  J26_WTII_n50_CA1_basal_cel1.pvec
Note :  Lucifer yellow was intracellularly injected.

Reference Article
Related Article Reference :  Specific cytoarchitectureal changes in hippocampal subareas in daDREAM mice.

Measurements
Soma Surface :  638.55 μm2
Number of Stems :  3
Number of Bifurcations :  10
Number of Branches :  23
Overall Width :  110.53 μm
Overall Height :  165.1 μm
Overall Depth :  59.61 μm
Average Diameter :  0.19 μm
Total Length :  1603.41 μm
Total Surface :  957.08 μm2
Total Volume :  45.46 μm3
Max Euclidean Distance :  159.74 μm
Max Path Distance :  186.04 μm
Max Branch Order :  3
Average Contraction :  0.85
Total Fragmentation :  1398
Partition Asymmetry :  0.37
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  63.46°
Average Bifurcation Angle Remote :  34.96°
Fractal Dimension :  1.05

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