8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_72929
Cell Name :  J26_TGII_n51_CA1_basal_cel2
Archive Name :  DeFelipe
Species Name :  mouse
Strain :  daDREAM
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  lucifer yellow
Slicing Direction :  coronal
Slice Thickness :  150  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-06-15
Date of Upload :  2017-11-28
Persistence Vector :  J26_TGII_n51_CA1_basal_cel2.pvec
Note :  Lucifer yellow was intracellularly injected.

Reference Article
Related Article Reference :  Specific cytoarchitectureal changes in hippocampal subareas in daDREAM mice.

Measurements
Soma Surface :  720.17 μm2
Number of Stems :  3
Number of Bifurcations :  24
Number of Branches :  51
Overall Width :  181.94 μm
Overall Height :  120.28 μm
Overall Depth :  84.36 μm
Average Diameter :  0.19 μm
Total Length :  3086.95 μm
Total Surface :  1842.61 μm2
Total Volume :  87.52 μm3
Max Euclidean Distance :  168.78 μm
Max Path Distance :  207.91 μm
Max Branch Order :  7
Average Contraction :  0.87
Total Fragmentation :  2351
Partition Asymmetry :  0.37
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  67.57°
Average Bifurcation Angle Remote :  48.88°
Fractal Dimension :  1.04

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