8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_243698
Cell Name :  J
Archive Name :  Alilain
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  Not reported
Max Age :  Not reported
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  peripheral nervous system
Secondary Brain Region :  dorsal root ganglion
Tertiary Brain Region :  Not reported
Primary Cell Class :  sensory
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.ndf
Experiment Protocol :  culture
Experimental Condition :  intermittent hypoxia
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  Not reported
Reconstruction Method :  NeuronJ
Date of Deposition :  2022-09-21
Date of Upload :  2022-10-27
Persistence Vector :  J.pvec
Note :  This reconstruction was obtained from a rat culture with daily intermittent hypoxia treatment for 5 days (2:32:00 duration, 5 min. cycles of 21% O2/10% O2) in vivo .

Reference Article
Related Article Reference :  Investigating The Effects of In-vivo Therapeutics Hypoxia Treatment Paradigms In Neurite Outgrowth Patterns

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  12
Number of Branches :  25
Overall Width :  567.15 μm
Overall Height :  496.64 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  4925.2 μm
Total Surface :  15473 μm2
Total Volume :  3868.24 μm3
Max Euclidean Distance :  610.08 μm
Max Path Distance :  1763.38 μm
Max Branch Order :  6
Average Contraction :  0.87
Total Fragmentation :  877
Partition Asymmetry :  0.3
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  136.82°
Average Bifurcation Angle Remote :  105°
Fractal Dimension :  1.02

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