8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_140259
Cell Name :  Img9PHA_n1_seg1
Archive Name :  Qiu
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  9.0 days
Max Age :  10.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  mid-septo-temporal
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Imaris.ims
Experiment Protocol :  culture
Experimental Condition :  MET activity inhibition (PHA665752)
Staining Method :  biocytin
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Imaris
Date of Deposition :  2019-03-28
Date of Upload :  2020-10-05
Persistence Vector :  Img9PHA_n1_seg1.pvec
Note :  100 nM PHA665752 was applied to culture medium at DIV7 for a duration of 5-7 days.

Reference Article
Related Article Reference :  Disruption of MET Receptor Tyrosine Kinase, an Autism Risk Factor, Impairs Developmental Synaptic Plasticity in the Hippocampus.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  122
Number of Branches :  246
Overall Width :  23.85 μm
Overall Height :  31.49 μm
Overall Depth :  4.45 μm
Average Diameter :  0.45 μm
Total Length :  205.33 μm
Total Surface :  292.35 μm2
Total Volume :  39.55 μm3
Max Euclidean Distance :  28.88 μm
Max Path Distance :  37.08 μm
Max Branch Order :  48
Average Contraction :  0.97
Total Fragmentation :  1234
Partition Asymmetry :  0.69
Average Rall's Ratio :  2.14
Average Bifurcation Angle Local :  95.26°
Average Bifurcation Angle Remote :  93.08°
Fractal Dimension :  1.02

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