8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_78042
Cell Name :  Im_Si_25
Archive Name :  Munoz-Cobo
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  17.5 days
Max Age :  17.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuronstudio.swc
Experiment Protocol :  culture
Experimental Condition :  siTCERG1
Staining Method :  green fluorescent protein
Slicing Direction :  Sagittal
Slice Thickness :  0.5  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2017-03-10
Date of Upload :  2017-11-28
Persistence Vector :  Im_Si_25.pvec

Reference Article
Related Article Reference :  Transcriptional Elongation Regulator 1 Affects Transcription and Splicing of Genes Associated with Cellular Morphology and Cytoskeleton Dynamics and IsRequired for Neurite Outgrowth in Neuroblastoma Cells and Primary NeuronalCultures.

Measurements
Soma Surface :  576.21 μm2
Number of Stems :  6
Number of Bifurcations :  73
Number of Branches :  152
Overall Width :  149.84 μm
Overall Height :  205.78 μm
Overall Depth :  0.61 μm
Average Diameter :  1.38 μm
Total Length :  1119.59 μm
Total Surface :  5676.84 μm2
Total Volume :  3271.29 μm3
Max Euclidean Distance :  113.89 μm
Max Path Distance :  230.23 μm
Max Branch Order :  13
Average Contraction :  0.97
Total Fragmentation :  1040
Partition Asymmetry :  0.63
Average Rall's Ratio :  26.94
Average Bifurcation Angle Local :  76.68°
Average Bifurcation Angle Remote :  72.12°
Fractal Dimension :  1.02

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