8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_78034
Cell Name :  Im_Si_15
Archive Name :  Munoz-Cobo
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  17.5 days
Max Age :  17.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuronstudio.swc
Experiment Protocol :  culture
Experimental Condition :  siTCERG1
Staining Method :  green fluorescent protein
Slicing Direction :  Sagittal
Slice Thickness :  0.5  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2017-03-10
Date of Upload :  2017-11-28
Persistence Vector :  Im_Si_15.pvec

Reference Article
Related Article Reference :  Transcriptional Elongation Regulator 1 Affects Transcription and Splicing of Genes Associated with Cellular Morphology and Cytoskeleton Dynamics and IsRequired for Neurite Outgrowth in Neuroblastoma Cells and Primary NeuronalCultures.

Measurements
Soma Surface :  263.89 μm2
Number of Stems :  4
Number of Bifurcations :  145
Number of Branches :  294
Overall Width :  150.14 μm
Overall Height :  208.82 μm
Overall Depth :  0.7 μm
Average Diameter :  1.01 μm
Total Length :  1784.89 μm
Total Surface :  6468.16 μm2
Total Volume :  2659.8 μm3
Max Euclidean Distance :  145.65 μm
Max Path Distance :  177.74 μm
Max Branch Order :  22
Average Contraction :  0.98
Total Fragmentation :  2203
Partition Asymmetry :  0.69
Average Rall's Ratio :  3.3
Average Bifurcation Angle Local :  90.55°
Average Bifurcation Angle Remote :  86.89°
Fractal Dimension :  1.02

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