8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_78026
Cell Name :  Im_Ct_7
Archive Name :  Munoz-Cobo
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  17.5 days
Max Age :  17.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuronstudio.swc
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Sagittal
Slice Thickness :  0.5  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2017-03-10
Date of Upload :  2017-11-28
Persistence Vector :  Im_Ct_7.pvec

Reference Article
Related Article Reference :  Transcriptional Elongation Regulator 1 Affects Transcription and Splicing of Genes Associated with Cellular Morphology and Cytoskeleton Dynamics and IsRequired for Neurite Outgrowth in Neuroblastoma Cells and Primary NeuronalCultures.

Measurements
Soma Surface :  748.61 μm2
Number of Stems :  15
Number of Bifurcations :  272
Number of Branches :  559
Overall Width :  144.2 μm
Overall Height :  194.22 μm
Overall Depth :  4.16 μm
Average Diameter :  0.76 μm
Total Length :  2552.14 μm
Total Surface :  7878.4 μm2
Total Volume :  3625.61 μm3
Max Euclidean Distance :  170.41 μm
Max Path Distance :  229.63 μm
Max Branch Order :  60
Average Contraction :  0.95
Total Fragmentation :  3302
Partition Asymmetry :  0.66
Average Rall's Ratio :  3.57
Average Bifurcation Angle Local :  84.8°
Average Bifurcation Angle Remote :  82.57°
Fractal Dimension :  1.04

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