8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_78011
Cell Name :  Im_Ct_16
Archive Name :  Munoz-Cobo
Species Name :  mouse
Strain :  CD1
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  17.5 days
Max Age :  17.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuronstudio.swc
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Sagittal
Slice Thickness :  0.5  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  20x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2017-03-10
Date of Upload :  2017-11-28
Persistence Vector :  Im_Ct_16.pvec

Reference Article
Related Article Reference :  Transcriptional Elongation Regulator 1 Affects Transcription and Splicing of Genes Associated with Cellular Morphology and Cytoskeleton Dynamics and IsRequired for Neurite Outgrowth in Neuroblastoma Cells and Primary NeuronalCultures.

Measurements
Soma Surface :  806.5 μm2
Number of Stems :  5
Number of Bifurcations :  194
Number of Branches :  393
Overall Width :  216.28 μm
Overall Height :  242.27 μm
Overall Depth :  1.45 μm
Average Diameter :  1.2 μm
Total Length :  2935.85 μm
Total Surface :  12686.2 μm2
Total Volume :  5609.4 μm3
Max Euclidean Distance :  155.58 μm
Max Path Distance :  204.87 μm
Max Branch Order :  23
Average Contraction :  0.96
Total Fragmentation :  2850
Partition Asymmetry :  0.6
Average Rall's Ratio :  2.92
Average Bifurcation Angle Local :  96.72°
Average Bifurcation Angle Remote :  94.42°
Fractal Dimension :  1.04

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